L. Gardan, C. Gouy, C. R. Samson, and R. , Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov, Int J Syst Evol Microbiol, vol.53, pp.381-391, 2003.

M. Perombelon and A. Kelman, Ecology of the soft rot erwinias, Annu Rev Phytopathol, vol.18, pp.361-387, 1980.

M. Pérombelon, Potato blackleg: epidemiology, host-pathogen interaction and control, Neth J Plant Pathol, vol.98, pp.135-146, 1992.

R. Samson, J. B. Legendre, R. Christen, M. Fischer-le-saux, W. Achouak et al., Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the genus Dickeya gen. nov. as Dickeya chrysanthemi comb. nov. and Dickeya paradisiaca comb. nov. and delineation of four novel species, Dickeya dadantii sp. nov., Dickeya dianthicola sp. nov., Dickeya dieffenbachiae sp. nov. and Dickeya zeae sp. nov, Int J Syst Evol Microbiol, vol.55, pp.1415-1427, 2005.

L. Hauben, E. R. Moore, L. Vauterin, M. Steenackers, J. Mergaert et al., Phylogenetic position of phytopathogens within the Enterobacteriaceae, Syst Appl Microbiol, vol.21, pp.80048-80057, 1998.

J. M. Van-der-wolf, E. H. Nijhuis, M. J. Kowalewska, G. S. Saddler, N. Parkinson et al., Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum), Int J Syst Evol Microbiol, vol.64, pp.768-774, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01208723

M. Van-der-wolf, J. , D. Boer, H. , S. Vreugdenhil et al., Bacterial pathogens of potato, Potato biology and biotechnology, pp.595-617, 2007.

I. K. Toth, J. M. Van-der-wolf, G. Saddler, E. Lojkowska, V. Hélias et al., Dickeya species: an emerging problem for potato production in Europe: Dickeya spp. on potato in Europe, Plant Pathol, vol.60, pp.385-399, 2011.

R. Czajkowski, M. Pérombelon, J. A. Van-veen, and J. M. Van-der-wolf, Control of blackleg and tuber soft rot of potato caused by Pectobacterium and Dickeya species: a review, Plant Pathol, vol.60, pp.999-1013, 2011.

R. Czajkowski, G. J. Grabe, and J. M. Van-der-wolf, Distribution of Dickeya spp. and Pectobacterium carotovorum subsp. carotovorum in naturally infected seed potatoes, Eur J Plant Pathol, vol.125, pp.263-275, 2009.

R. Czajkowski, W. J. De-boer, J. A. Van-veen, and J. M. Van-der-wolf, Downward vascular translocation of a green fluorescent protein-tagged strain of Dickeya sp.(biovar 3) from stem and leaf inoculation sites on potato, Phytopathology, vol.100, pp.1128-1137, 2010.

R. Czajkowski, W. J. De-boer, H. Velvis, and J. M. Van-der-wolf, Systemic colonization of potato plants by a soilborne, green fluorescent proteintagged strain of Dickeya sp, Phytopathology, vol.3, pp.134-142, 2010.

A. Kwasiborski, S. Mondy, A. Beury-cirou, and D. Faure, Genome sequence of the Pectobacterium atrosepticum strain cfbp6276, causing blackleg and soft rot diseases on potato plants and tubers, Genome Announc, vol.1, issue.3, pp.374-387, 2013.

S. Khayi, S. Mondy, A. Beury-cirou, M. Moumni, V. Helias et al.,

, Genome sequence of the emerging plant pathogen Dickeya solani strain RNS 08.23.3.1A, Genome Announc, vol.2, issue.1, pp.1270-1283

J. Pédron, S. Mondy, Y. R. Des-essarts, F. Van-gijsegem, and D. Faure, Genomic and metabolic comparison with Dickeya dadantii 3937 reveals the emerging Dickeya solani potato pathogen to display distinctive metabolic activities and T5SS/T6SS-related toxin repertoire, BMC Genomics, vol.15, p.283, 2014.

V. Hélias, P. Hamon, E. Huchet, J. Wolf, and D. Andrivon, Two new effective semiselective crystal violet pectate media for isolation of Pectobacterium and Dickeya, Plant Pathol, vol.61, pp.339-345, 2012.

A. Crépin, C. Barbey, A. Beury-cirou, V. Hélias, L. Taupin et al., Quorum sensing signaling molecules produced by reference and emerging soft-rot bacteria (Dickeya and Pectobacterium spp.), PLoS One, vol.7, 2012.

A. Crépin, A. Beury-cirou, C. Barbey, C. Farmer, V. Hélias et al., N-Acyl homoserine lactones in diverse Pectobacterium and Dickeya plant pathogens: diversity, abundance, and involvement in virulence, Sensors, vol.12, pp.3484-3497, 2012.

J. Cigna, R. Des-essarts, Y. Mondy, S. Hélias, V. Beury-cirou et al., Draft genome sequences of Pseudomonas fluorescens strains PA4C2 and PA3G8 and Pseudomonas putida PA14H7, three biocontrol bacteria against Dickeya phytopathogens, Genome Announc, vol.3, issue.1, pp.1503-1517, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01436131

M. Boetzer, C. V. Henkel, H. J. Jansen, D. Butler, and W. Pirovano, Scaffolding pre-assembled contigs using SSPACE, Bioinformatics, vol.27, pp.578-579, 2011.

R. K. Aziz, D. Bartels, A. A. Best, M. Dejongh, T. Disz et al., The RAST server: Rapid Annotations using Subsystems Technology, BMC Genomics, vol.9, p.75, 2008.

R. Overbeek, R. Olson, G. D. Pusch, G. J. Olsen, J. J. Davis et al., The SEED and the rapid annotation of microbial genomes using subsystems technology (RAST), Nucleic Acids Res, vol.42, pp.206-214, 2014.

R. Des and E. ,

, Genome Announcements