Physics of microswimmers-single particle motion and collective behavior: a review, Reports on Progress in Physics, vol.78, issue.5, p.56601, 2015. ,
Active particles in complex and crowded environments, Reviews of Modern Physics, vol.88, issue.4, p.45006, 2016. ,
Random Walks in Biology, Princeton Paperbacks, 1993. ,
Responding to chemical gradients: bacterial chemotaxis, Current opinion in cell biology, vol.24, issue.2, pp.262-270, 2012. ,
, The European Physical Journal Special Topics, vol.225, pp.2173-2188, 2016.
, Magnetoreception and Magnetosomes in Bacteria, pp.1-24, 2007.
Swimming with magnets: from biological organisms to synthetic devices, Physics Reports, vol.789, pp.1-54, 2019. ,
URL : https://hal.archives-ouvertes.fr/cea-01930113
Bio-Hybrid Cell-Based Actuators for Microsystems, Small, vol.10, pp.3831-3851, 2014. ,
Microscopic artificial swimmers, Nature, vol.437, pp.862-865, 2005. ,
URL : https://hal.archives-ouvertes.fr/hal-00015847
Dynamical configurations and bistability of helical nanostructures under external torque, Physical Review E, vol.86, issue.3, p.31401, 2012. ,
Magnetic guidance of organisms Annual review of biophysics and bioengineering, vol.13, pp.85-103, 1984. ,
Diversity of Magneto-Aerotactic Behaviors and Oxygen Sensing Mechanisms in Cultured Magnetotactic Bacteria, Biophysical Journal, vol.107, issue.2, pp.527-538, 2014. ,
Influence of Magnetic Fields on Magneto-Aerotaxis, PLOS One, vol.9, pp.1-10, 2014. ,
Quantifying the Magnetic Advantage in Magnetotaxis, Biophysical journal, vol.91, issue.3, pp.1098-1107, 2006. ,
Magneto-chemotaxis in sediment: First insights, PLoS One, vol.9, issue.7, p.102810, 2014. ,
Multifunctional Bacteria-Driven Microswimmers for Targeted Active Drug Delivery, ACS Nano, 2017. ,
Biohybrid and Bioinspired Magnetic Microswimmers, Small, vol.1704374, 2018. ,
URL : https://hal.archives-ouvertes.fr/cea-01927073
Magneto-aerotactic bacteria deliver drug-containing nanoliposomes to tumour hypoxic regions, Nature nanotechnology, vol.11, pp.941-947, 2016. ,
Biased Random Walk Models for Chemotaxis and Related Diffusion Approximations, Journal of mathematical biology, vol.9, pp.147-177, 1980. ,
Theory of continuum random walks and application to chemotaxis, Physical Review E, vol.48, issue.4, p.2553, 1992. ,
Active brownian particles, The European Physical Journal Special Topics, vol.202, issue.1, pp.1-162, 2012. ,
Logarithmic sensing in Escherichia coli bacterial chemotaxis, Biophysical journal, vol.96, issue.6, pp.2439-2448, 2009. ,
Active Brownian particles and run-and-tumble particles separate inside a maze, Scientific Reports, vol.6, p.37670, 2016. ,
Swim stress, motion, and deformation of active matter: effect of an external field, Soft Matter, vol.10, pp.9433-9445, 2014. ,
Bacteria display optimal transport near surfaces, Nature Physics, vol.15, issue.6, pp.610-615, 2019. ,
coli Tumbles by Rotational Diffusion. Implications for Chemotaxis, PLoS ONE, vol.7, issue.4, 2012. ,
High-throughput 3D tracking of bacteria on a standard phase contrast microscope, Nature Communications, vol.6, p.8776, 2015. ,
Chemotaxis in Escherichia coli analysed by Three-dimensional Tracking, Nature, vol.239, pp.500-504, 1972. ,
Temporal stimulation of chemotaxis in Escherichia coli, Proceedings of the National Academy of Sciences, vol.71, issue.4, pp.1388-1392, 1974. ,
Bacterial strategies for chemotaxis response, Proceedings of the National Academy of Sciences, vol.107, issue.4, pp.1391-1396, 2010. ,
Reversal of Flagellar Rotation in Monotrichous and Peritrichous Bacteria: Generation of Changes in Direction, Journal of bacteriology, vol.119, issue.2, pp.640-642, 1974. ,
Polarity of bacterial magnetotaxis is controlled by aerotaxis through a common sensory pathway, Nature communications, vol.5, p.5398, 2014. ,
, Hydrodynamic Interactions in Colloidal and Biological Systems. Dr. Rer. Nat. Dissertation at Konstanz University, 2006.
, The Art of Scientific Computing, 1992.
The Fokker-Planck Equation, 1989. ,
Migration of magnetotactic bacteria in porous media, Biomicrofluidics, vol.12, issue.1, p.11101, 2018. ,
Growth and magnetosome formation by microaerophilic Magnetospirillum strains in an oxygen-controlled fermentor, Applied Microbiology and Biotechnology, vol.61, p.12764570, 2003. ,
Statistical measures of bacterial motility and chemotaxis, Journal of theoretical biology, vol.50, issue.2, pp.90094-90100, 1975. ,
Measurement of the magnetic moment of single Magnetospirillum gryphiswaldense cells by magnetic tweezers, Scientific Reports, vol.7, 2018. ,
Feedback between motion and sensation provides nonlinear boost in run-and-tumble navigation, PLoS Comput Biol, vol.2017, issue.3 ,
A simple method to estimate the magnetic moment of magnetic micro-particles, Journal of Magnetism and Magnetic Materials, vol.320, 2008. ,
Navigational compass in magnetotactic bacteria, Journal of Magnetism and Magnetic Materials, 1980. ,
A Comparison of Methods to Measure the Magnetic Moment of Magnetotactic Bacteria through Analysis of Their Trajectories in External Magnetic Fields, PLOS One, vol.8, issue.12, 2013. ,
Velocity Condensation for Magnetotactic Bacteria, Physical review letters, vol.116, issue.16, pp.168101-168106, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01628787
Opposite and Coordinated Rotation of Amphitrichous Flagella Governs Oriented Swimming and Reversals in a Magnetotactic Spirillum, Journal of bacteriology, vol.197, issue.20, pp.3275-3282, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01452063
Quantitative modeling of Escherichia coli chemotactic motion in environments varying in space and time, PLoS Comput. Bio, vol.6, issue.4, 2010. ,
Limits of feedback control in bacterial chemotaxis, PLoS Comput. Bio, vol.10, issue.6, 2014. ,
Dynamic states of swimming bacteria in a nematic liquid crystal cell with homeotropic alignment, New J. Phys, vol.19, p.55006, 2017. ,
Model of bacterial band formation in aerotaxis, Biophysical journal, vol.85, issue.6, pp.3558-3574, 2003. ,
Magnetotactic bacteria at the geomagnetic equator, Science, vol.212, issue.4500, pp.1269-70, 1981. ,
Magnetotaxis Enables Magnetotactic Bacteria to Navigate in Flow, Small, vol.14, issue.5, p.1702982, 2017. ,
Highspeed Helical Microswimming and Rapid Reorientations of Bacteria ,
, Magnetotactic bacteria powered biohybrids target E. coli biofilms, vol.11, p.9968, 2017.
Non-genetic diversity modulates population performance Mol, Sys. Biol, vol.12, p.895, 2016. ,
Markovian robots: Minimal navigation strategies for active particles, Phys. Rev. E, vol.97, p.42604, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-01742399
Navigation with magnetic nanoparticles: magnetotactic bacteria and magnetic micro-robots, Physica Scripta, vol.165, p.14044, 2015. ,
Magnetite from magnetotactic bacteria: Size distributions and twinning, Am. Mineral, vol.83, pp.1387-1398, 1998. ,
Environmental parameters affect the physical properties of fast-growing magnetosomes, Am. Mineral, vol.93, pp.463-469, 2008. ,
URL : https://hal.archives-ouvertes.fr/hal-00646195
Survey of motile microaerophilic bacterial morphotypes in the oxygen gradient above a marine sulfidic sediment, Appl. and Environ. Microbiol, vol.71, pp.3682-3691, 2005. ,