M. F. Hohmann-marriott and R. E. Blankenship, Evolution of photosynthesis, Annu. Rev. Plant. Biol, vol.62, pp.515-548, 2011.

N. Adir, Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant, Photosynth. Res, vol.85, pp.15-32, 2005.

L. X. Shi and W. P. Schröder, The low molecular mass subunits of the photosynthetic supracomplex, photosystem II, Biochim Biophys Acta, vol.1608, pp.75-96, 2004.

J. L. Roose, K. M. Wegener, and H. B. Pakrasi, The extrinsic proteins of photosystem II, Photosynth. Res, vol.92, pp.369-387, 2007.

T. M. Bricker, J. L. Roose, R. D. Fagerlund, L. K. Frankel, and J. J. Eaton-rye, The extrinsic proteins of photosystem II, Biochim. Biophys. Acta, vol.1817, pp.121-142, 2012.

K. Ifuku and T. Noguchi, Structural coupling of extrinsic proteins with the oxygen-evolving center in photosystem II, Front. Plant Sci, vol.7, p.84, 2016.

J. G. García-cerdán, L. Kovács, T. Tóth, S. Kereïche, E. Aseeva et al., The PsbW protein stabilizes the supramolecular organization of photosystem II in higher plants, Plant J, vol.65, pp.368-381, 2011.

B. Loll, J. Kern, W. Saenger, A. Zouni, and J. Biesiadka, Towards complete cofactor arrangement in the 3.0 angstrom resolution structure of photosystem II, Nature, vol.438, pp.1040-1044, 2005.

A. Guskov, J. Kern, A. Gabdulkhakov, M. Broser, A. Zouni et al., Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride, Nat. Struct. Mol. Biol, vol.16, pp.334-342, 2009.
DOI : 10.2210/pdb4v62/pdbx

Y. Umena, K. Kawakami, J. R. Shen, and N. Kamiya, Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 A, Nature, vol.473, pp.55-60, 2011.

S. Caffarri, T. Tibiletti, R. C. Jennings, and S. Santabarbara, A comparison between plant photosystem I and photosystem II architecture and functioning, Curr. Protein Pept. Sci, vol.15, pp.296-331, 2014.
DOI : 10.2174/1389203715666140327102218
URL : http://europepmc.org/articles/pmc4030627?pdf=render

S. Caffarri, R. Kouril, S. Kereïche, E. J. Boekema, C. et al., Functional architecture of higher plant photosystem II supercomplexes, EMBO J, vol.28, pp.3052-3063, 2009.
DOI : 10.1038/emboj.2009.232
URL : http://emboj.embopress.org/content/28/19/3052.full.pdf

J. P. Dekker and E. J. Boekema, Supramolecular organization of thylakoid membrane proteins in green plants, Biochim. Biophys. Acta, vol.1706, pp.12-39, 2005.

M. Ballottari, J. Girardon, L. Dall'osto, and R. Bassi, Evolution and functional properties of photosystem II light harvesting complexes in eukaryotes, Biochim. Biophys. Acta, vol.1817, pp.143-157, 2012.

S. Jansson, A guide to the Lhc genes and their relatives in Arabidopsis, Trends Plant Sci, vol.4, pp.236-240, 1999.

S. Caffarri, R. Croce, L. Cattivelli, and R. Bassi, A look within LHCII: differential analysis of the Lhcbl-3 complexes building the major trimeric antenna complex of higher-plant photosynthesis, Biochemistry, vol.43, pp.9467-9476, 2004.

P. Dainese and R. Bassi, Subunit stoichiometry of the chloroplast photosystem-II antenna system and aggregation state of the component chlorophyll-a/b binding proteins, J. Biol. Chem, vol.266, pp.8136-8142, 1991.

E. J. Boekema, H. Van-roon, J. F. Van-breemen, and J. P. Dekker, Supramolecular organization of photosystem II and its light-harvesting antenna in partially solubilized photosystem II membranes, Eur. J. Biochem, vol.266, pp.444-452, 1999.

A. E. Yakushevska, P. E. Jensen, W. Keegstra, H. Van-roon, H. V. Scheller et al., Supermolecular organization of photosystem II and its associated light-harvesting antenna in Arabidopsis thaliana, Eur. J. Biochem, vol.268, pp.6020-6028, 2001.

C. Pagliano, J. Nield, F. Marsano, T. Pape, S. Barera et al., Proteomic characterization and three-dimensional electron microscopy study of PSII-LHCII supercomplexes from higher plants, Biochim. Biophys. Acta, vol.1837, pp.1454-1462, 2014.

R. Tokutsu, N. Kato, K. H. Bui, T. Ishikawa, and J. Minagawa, Revisiting the supramolecular organization of photosystem II in Chlamydomonas reinhardtii, J. Biol. Chem, vol.287, pp.31574-31581, 2012.

B. Drop, M. Webber-birungi, S. K. Yadav, A. Filipowicz-szymanska, F. Fusetti et al., Light-harvesting complex II (LHCII) and its supramolecular organization in Chlamydomonas reinhardtii, Biochim. Biophys. Acta, vol.1837, pp.63-72, 2014.
DOI : 10.1016/j.bbabio.2013.07.012
URL : https://doi.org/10.1016/j.bbabio.2013.07.012

C. Büchel and W. Kühlbrandt, Structural differences in the inner part of photosystem II between higher plants and cyanobacteria, Photosynth. Res, vol.85, pp.3-13, 2005.

J. Nield, M. Balsera, J. De-las-rivas, and J. Barber, Three-dimensional electron cryo-microscopy study of the extrinsic domains of the oxygen-evolving complex of spinach: assignment of the PsbO protein, J. Biol. Chem, vol.277, pp.15006-15012, 2002.

X. Wei, X. Su, P. Cao, X. Liu, W. Chang et al., Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution, Nature, vol.534, pp.69-74, 2016.
DOI : 10.1038/nature18020

S. Caffarri, K. Broess, R. Croce, and H. Van-amerongen, Excitation energy transfer and trapping in higher plant photosystem II complexes with different antenna sizes, Biophys. J, vol.100, pp.2094-2103, 2011.
DOI : 10.1016/j.bpj.2011.03.049
URL : https://doi.org/10.1016/j.bpj.2011.03.049

P. Galka, S. Santabarbara, T. T. Khuong, H. Degand, P. Morsomme et al., Functional analyses of the plant photosystem I-light-harvesting complex II supercomplex reveal that light-harvesting complex II loosely bound to photosystem II is a very efficient antenna for photosystem I in state II, Plant Cell, vol.24, pp.2963-2978, 2012.

S. Barera, C. Pagliano, T. Pape, G. Saracco, and J. Barber, Characterization of PSII-LHCII supercomplexes isolated from pea thylakoid membrane by one-step treatment with ?-and ?-dodecyl-DD-maltoside, Philos. Trans. R. Soc. Lond. B Biol. Sci, vol.367, pp.3389-3399, 2012.

G. F. Peter and J. P. Thornber, Biochemical composition and organization of higher plant photosystem II light-harvesting pigment-proteins, J. Biol. Chem, vol.266, pp.16745-16754, 1991.

K. Broess, G. Trinkunas, A. Van-hoek, R. Croce, and H. Van-amerongen, Determination of the excitation migration time in Photosystem II-consequences for the membrane organization and charge separation parameters, Biochim. Biophys. Acta, vol.1777, pp.404-409, 2008.

R. Kou?il, E. Wientjes, J. B. Bultema, R. Croce, and E. J. Boekema, High-light vs. low-light: effect of light acclimation on photosystem II composition and organization in Arabidopsis thaliana, Biochim. Biophys. Acta, vol.1827, pp.411-419, 2013.

P. Horton, A. V. Ruban, D. Rees, A. A. Pascal, G. Noctor et al., Control of the light-harvesting function of chloroplast membranes by aggregation of the LHCII chlorophyll-protein complex, FEBS Lett, vol.292, pp.1-4, 1991.

I. Schmidt-krey, Electron crystallography of membrane proteins; two-dimensional crystallization and screening by electron microscopy, Methods, vol.41, pp.417-426, 2007.

E. Nogales, The development of cryo-EM into a mainstream structural biology technique, Nat. Methods, vol.13, pp.24-27, 2016.

P. S. Chae, S. G. Rasmussen, R. R. Rana, K. Gotfryd, R. Chandra et al., Maltose-neopentyl glycol (MNG) amphiphiles for solubilization, stabilization and crystallization of membrane proteins, Nat. Methods, vol.7, pp.1003-1008, 2010.

J. Standfuss, A. C. Terwisscha-van-scheltinga, M. Lamborghini, and W. Küh-lbrandt, Mechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5A resolution, EMBO J, vol.24, pp.919-928, 2005.

Y. Allahverdiyeva, M. Suorsa, F. Rossi, A. Pavesi, M. M. Kater et al., Arabidopsis plants lacking PsbQ and PsbR subunits of the oxygen-evolving complex show altered PSII super-complex organization and short-term adaptive mechanisms, Plant J, vol.75, pp.671-684, 2013.

J. L. Roose, L. K. Frankel, M. P. Mummadisetti, and T. M. Bricker, The extrinsic proteins of photosystem II: update, Planta, vol.243, pp.889-908, 2016.

J. R. Shen, K. Satoh, and S. Katoh, Isolation of an oxygen-evolving photosystem-Ii preparation containing only one tightly bound calcium atom from a chlorophyll-B-deficient mutant of rice, Biochim. Biophys. Acta, vol.936, pp.386-394, 1988.

P. H. Homann, The chloride and calcium requirement of photosynthetic water oxidation-effects of pH, Biochim. Biophys. Acta, vol.934, pp.1-13, 1988.

D. A. Berthold, G. T. Babcock, and C. F. Yocum, A highly resolved, oxygen-evolving photosystem II preparation from spinach thylakoid membranes. EPR and electron-transport properties, FEBS Lett, vol.134, pp.231-234, 1981.

T. Kuwabara and N. Murata, Inactivation of photosynthetic oxygen evolution and concomitant release of 3 polypeptides in the photosystem-Ii particles of spinach-chloroplasts, Plant Cell Physiol, vol.23, pp.533-539, 1982.

M. Miller, The release of polypeptides and manganese from oxygen-evolving photosystem-Ii preparations following zinc-treatment, FEBS Lett, vol.189, pp.355-360, 1985.

I. Enami, K. Kamino, J. R. Shen, K. Satoh, and S. Katoh, Isolation and characterization of photosystem-Ii complexes which lack light-harvesting chlorophyll-a/B proteins but retain 3 extrinsic proteins related to oxygen evolution from spinach, Biochim. Biophys. Acta, vol.977, pp.33-39, 1989.

G. C. Papageorgiou and N. Murata, The unusually strong stabilizing effects of glycine betaine on the structure and function of the oxygenevolving photosystem-Ii complex, Photosynth. Res, vol.44, pp.243-252, 1995.

S. Caffarri, F. Passarini, R. Bassi, C. , and R. , A specific binding site for neoxanthin in the monomeric antenna proteins CP26 and CP29 of photosystem II, FEBS Lett, vol.581, pp.4704-4710, 2007.

A. V. Ruban, P. J. Lee, M. Wentworth, A. J. Young, and P. Horton, Determination of the stoichiometry and strength of binding of xanthophylls to the photosystem II light harvesting complexes, J. Biol. Chem, vol.274, pp.10458-10465, 1999.

S. Caffarri, R. Croce, J. Breton, and R. Bassi, The major antenna complex of photosystem II has a xanthophyll binding site not involved in light harvesting, J. Biol. Chem, vol.276, pp.35924-35933, 2001.

Z. Liu, H. Yan, K. Wang, T. Kuang, J. Zhang et al., Crystal structure of spinach major light-harvesting complex at 2.72 A resolution, Nature, vol.428, pp.287-292, 2004.

R. Grisshammer, Understanding recombinant expression of membrane proteins, Curr. Opin. Biotechnol, vol.17, pp.337-340, 2006.

J. Payandeh, T. Scheuer, N. Zheng, and W. A. Catterall, The crystal structure of a voltage-gated sodium channel, Nature, vol.475, pp.353-358, 2011.

S. Faham, G. L. Boulting, E. A. Massey, S. Yohannan, D. Yang et al., Crystallization of bacteriorhodopsin from bicelle formulations at room temperature, Protein Sci, vol.14, pp.836-840, 2005.

R. Ujwal, D. Cascio, J. P. Colletier, S. Faham, J. Zhang et al., The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating, Proc. Natl. Acad. Sci. U.S.A, vol.105, pp.17742-17747, 2008.

K. R. Vinothkumar, Structure of rhomboid protease in a lipid environment, J. Mol. Biol, vol.407, pp.232-247, 2011.

E. C. Engelmann, G. Zucchelli, F. M. Garlaschi, A. P. Casazza, J. et al., The effect of outer antenna complexes on the photochemical trapping rate in barley thylakoid photosystem II, Biochim. Biophys. Acta, vol.1706, pp.276-286, 2005.

G. Tumino, A. P. Casazza, E. Engelmann, F. M. Garlaschi, G. Zucchelli et al., Fluorescence lifetime spectrum of the plant photosystem II core complex: photochemistry does not induce specific reaction center quenching, Biochemistry, vol.47, pp.10449-10457, 2008.

R. Croce, G. Canino, F. Ros, and R. Bassi, Chromophore organization in the higher-plant photosystem II antenna protein CP26, Biochemistry, vol.41, pp.7334-7343, 2002.

C. Campoli, S. Caffarri, J. T. Svensson, R. Bassi, A. M. Stanca et al., Parallel pigment and transcriptomic analysis of four barley albina and xantha mutants reveals the complex network of the chloroplast-dependent metabolism, Plant Mol. Biol, vol.71, pp.173-191, 2009.

U. K. Laemmli, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, vol.227, pp.680-685, 1970.

H. Schägger, Tricine-SDS-PAGE, Nat. Protoc, vol.1, pp.16-22, 2006.

T. Tibiletti, P. Auroy, G. Peltier, and S. Caffarri, Chlamydomonas reinhardtii PsbS protein is functional and accumulates rapidly and transiently under high light, Plant Physiol, 2016.
URL : https://hal.archives-ouvertes.fr/cea-02137065

A. Crepin, Stefano Santabarbara and Stefano Caffarri Arabidopsis Supercomplexes from

, Biochemical and Spectroscopic Characterization of Highly Stable Photosystem II, vol.291, pp.19157-19171, 2016.

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