Charge compensation for imaging large insulating samples by using secondary ion tandem mass spectrometry, Journal of the American Society for Mass Spectrometry, vol.5, pp.37-43, 1994. ,
Organic ion imaging beyond the limit of static secondary ion mass spectrometry, Journal of the American Society for Mass Spectrometry, vol.6, pp.1047-1058, 1995. ,
Imaging of subcellular structures by scanning ion microscopy and mass spectrometry -Advantage of cryofixation and freeze substitution procedure over chemical preparation, Biology of the Cell, vol.89, pp.199-210, 1997. ,
Imaging with mass spectrometry, Chemical Reviews, vol.99, pp.2977-3005, 1999. ,
Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS, Analytical Chemistry, vol.69, pp.4751-4760, 1997. ,
Automated mass spectrometry imaging with a matrix-assisted laser desorption ionization time-of-flight instrument, Journal of the American Society for Mass Spectrometry, vol.10, pp.67-71, 1999. ,
MALDI Ion Imaging and Biolocial Ion Imaging with a new Scanning UV-Laser Microprobe, Proceedings of the 42 nd Annual Conference on Mass Spectrometry and Allied Topics, 1994. ,
Imaging mass spectrometry: A new technology for the analysis of protein expression in mammalian tissues, Nature medicine, vol.7, pp.493-496, 2001. ,
An automated peak identification/calibration procedure for high-dimensional protein measures from mass spectrometers, Journal of Biomedicine and Biotechnology, vol.4, pp.242-248, 2003. ,
Imaging mass spectrometry: a new tool to investigate the spatial organization of peptides and proteins in mammalian tissue sections, Current Opinion in Chemical Biology, vol.6, pp.676-681, 2002. ,
Imaging mass spectrometry, Mass Spectrometry Reviews, vol.26, pp.606-643, 2007. ,
Scanning microprobe matrix-assisted laser desorption ionization (SMALDI) mass spectrometry: Instrumentation for sub-micrometer resolved LDI and MALDI surface analysis, Journal of the American Society of Mass Spectrometry, vol.13, pp.735-748, 2002. ,
High-resolution MALDI imaging mass spectrometry allows localization of peptide distributions at cellular length scales in pituitary tissue sections, International Journal of Mass Spectrometry, vol.260, pp.203-211, 2007. ,
Imaging mass spectrometry using a delay line detector, European Journal of Mass Spectrometry, vol.16, issue.1, pp.35-45, 2010. ,
Mass spectrometry imaging with high-resolution in mass and space (HR² MSI) for reliable investigation of drug compound distributions on the cellular level, Analytical and Bioanalytical Chemistry, vol.401, pp.65-73, 2011. ,
Direct tissue analysis using matrixassisted laser desorption/ionization mass spectrometry: practical aspects of sample preparation, Journal of Mass Spectrometry, vol.38, pp.699-708, 2003. ,
MALDI-MS direct tissue analysis of proteins: Improving signal sensitivity using organic treatments, Analytical Chemistry, vol.78, pp.7145-7153, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-00086901
Enhancement of protein sensitivity for MALDI imaging mass spectrometry after chemical treatment of tissue sections, Journal of the American Society of Mass Spectrometry, vol.19, pp.1069-1077, 2008. ,
Imaging mass spectrometry and its methodological application to murine tissue, Journal of Proteomics & Bioinformatics, vol.1, 2008. ,
Matrix sublimation/recrystallization for imaging proteins by mass spectrometry at high spatial resolution, Analytical Chemistry, vol.83, pp.5728-5734, 2011. ,
Direct profiling and imaging of peptides and proteins from mammalian cells and tissue sections by mass spectrometry, Electrophoresis, vol.23, pp.3125-3135, 2002. ,
Imaging mass spectrometry: Principles and potentials, Toxicologic pathology, vol.33, pp.92-101, 2005. ,
Imaging of peptides in the rat brain using MALDI-FTICR mass spectrometry, Journal of the American Society for Mass Spectrometry, vol.18, issue.1, pp.145-151, 2007. ,
, Histology by Mass Spectrometry: Label-Free Tissue Characterization Obtained from High-Accuracy Bioanalytical Imaging, vol.49, pp.3834-3838, 2010.
MALDI imaging mass spectrometry: molecular snapshots of biological systems, Nature methods, vol.4, issue.10, pp.828-833, 2007. ,
Imaging mass spectrometry: principle and application, Biophysics Reviews, vol.1, pp.131-139, 2009. ,
MetDAT: a modular and workflow-based free online pipeline for mass spectrometry data processing, analysis and interpretation, Bioinformatics, vol.26, issue.20, pp.2639-2640, 2010. ,
Weighted elastic net model for mass spectrometry imaging processing, Mathematical Modelling of Natural Phenomena, vol.5, issue.3, pp.115-133, 2010. ,
Elastic net-based framework for imaging mass spectrometry data biomarker selection and classification, Statistics in medicine, vol.30, pp.753-768, 2011. ,
Development of imaging mass spectrometry (IMS) dataset extractor software, IMS convolution, Analytical and Bioanalytical Chemistry, vol.401, pp.183-193, 2011. ,
,
Robust data processing and normalization strategy for MALDI mass spectrometric imaging, Analytical Chemistry, vol.84, pp.1310-1319, 2012. ,
MITICS (MALDI Imaging Team Imaging Computing System): A new open source mass spectrometry imaging software, Journal of Proteomics, vol.71, pp.332-345, 2008. ,
Spatial and spectral correlations in MALDI mass spectrometry images by clustering and multivariate analysis, Analytical Chemistry, vol.77, pp.6118-6124, 2005. ,
,
Multivariate analysis of imaging mass spectrometry data, Proceedings of the 7 th IEEE International Conference on BioInformatics and BioEngineering, pp.472-479, 2007. ,
Extended data analysis strategies for high resolution imaging MS: New methods to deal with extremely large image hyperspectral datasets, International Journal of Mass Spectrometry, vol.260, pp.222-236, 2007. ,
Concise representation of mass spectrometry images by probabilistic latent semantic analysis, Analytical Chemistry, vol.80, issue.24, pp.9649-9658, 2008. ,
, Standard Specification for Analytical Data Interchange Protocol for Chromatographic Data, ASTM Standard E1947 -98, 2009.
A common open representation of mass spectrometry data and its application in a proteomics research environment, Nature Biotechnology, vol.22, issue.11, pp.1459-1466, 2004. ,
What is mzXML good for?, Expert Review of Proteomics, vol.2, issue.6, pp.839-845, 2005. ,
Five years of progress in the Standardization of Proteomics Data, 4 th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative, vol.7, pp.3436-3440, 2007. ,
mzML: A single, unifying data format for mass spectrometer output, Proteomics, vol.8, issue.14, pp.2776-2777, 2008. ,
, mzML-a Community Standard for Mass Spectrometry Data, vol.1, 2011.
Imaging mzML (imzML) -a common data format for imaging mass spectrometry, HUPO PSI Workshop, pp.26-29, 2009. ,
imzML: Imaging Mass Spectrometry Markup Language: A Common Data Format for Mass Spectrometry Imaging in Data Mining in Proteomics: From Standards to Applications, Methods in Molecular Biology, vol.696, pp.205-224, 2011. ,
imzML -a common data format for the flexible exchange and processing of mass spectrometry imaging data, Journal of Proteomics, vol.75, issue.16, pp.5106-5110, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-00741330
MALDI Imaging Mass Spectrometry (MALDI-IMS)-Application of spatial proteomics for ovarian cancer classification and diagnosis, International Journal of Molecular Sciences, vol.12, issue.1, pp.773-794, 2011. ,
Advanced mass calibration and visualization for FT-ICR mass spectrometry imaging, Journal of the American Society of Mass Spectrometry, vol.23, issue.11, pp.1865-1872, 2012. ,
Methods for Full Resolution Data Exploration and Visualization for large 2D and 3D Mass Spectrometry Imaging Datasets, 2013. ,
Self-organized formation of topologically correct feature maps, Biological Cybernetics, vol.43, pp.59-69, 1982. ,
, Collection Mathématiques et applications, p.63, 2008.
The elements of statistical learnings -Data mining, inferences and predictions, 2001. ,
Stochastic dimensionality reduction for K-means clustering, 2011. ,
Random projection trees and low dimensional manifolds, Proceedings of the 40th annual ACM symposium on Theory of computing, pp.537-546, 2008. ,
Fast approximate spectral clustering, Proceedings of the 15th ACM Conference on Knowledge Discovery and Data Mining (SIGKDD), pp.907-916, 2009. ,
Aerosol time-of-flight mass spectrometry data analysis: a benchmark of clustering algorithms, Analytica Chimica Acta, vol.585, issue.1, pp.38-54, 2007. ,
Diffusion maps and coarse graining: a unified framework for dimensionality reduction -Graph partitioning and data set parameterization, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.28, issue.9, pp.1393-1403, 2006. ,
Data fusion and multicue data matching by diffusion maps, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.28, issue.11, pp.1784-1797, 2006. ,
Diffusion Maps, Applied and Computational Harmonic Analysis, vol.21, pp.5-30, 2006. ,
Alignment by maximization of mutual information, Proceedings of the 5th Int. Conf. Computer Vision, pp.16-23, 1995. ,
Optimization of Mutual Information for Multiresolution Image Registration, IEEE Transactions on Image Processing, vol.9, issue.12, pp.2083-2099, 2000. ,
, Ion image reconstruction using BioMap software. Imaging Mass Spectrometry, pp.113-126, 2010.
Antimicrobial lipids at the skin surface, Journal of Lipid Research, vol.49, pp.4-11, 2008. ,
The role of sebaceous gland activity and scalp microfloral metabolism in the etiology of seborrheic dermatitis and Dandruff, Journal of Investigative dermatology, vol.10, pp.194-197, 2005. ,
VLAM-G: a grid-based virtual laboratory, Scientific Programming, vol.10, pp.173-181, 2002. ,
Tools and strategies for visualization of large image data sets in high-resolution imaging mass spectrometry, Review of Scientific Instruments, vol.78, p.53716, 2007. ,